Program

Monday 10th of May 2010

13.00 - 13.15Welcome
13.15 - 14.15Martin Krallinger — CNIO, Spain
Tutorial on Bio Text Mining (I) [pdf]
14.15 - 15.15Martin Krallinger — CNIO, Spain
Tutorial on Bio Text Mining (II)
15.15 - 15.45Coffee break
15.45 - 16.45Sampo Pyysalo — University of Tokyo, Japan
Entities, relations, events: representing biomolecular semantics [pdf]
16.45 - 17.45Flash presentations posters
17.45 - 18.30Poster Session with drinks
18.30 - 20.00Social Program: Visit to Ghent
20.00Social Program: Conference dinner

Tuesday 11th of May 2010

10.00 - 11.00Kevin Cohen — Center for Computational Pharmacology and The MITRE Corporation, USA
Integrating text mining into high-throughput assay analysis [pdf]
11.00 - 11.30Coffee break
11.30 - 12.30Filip Ginter — University of Turku, Finland
Event extraction on PubMed scale [pdf]
12.30 - 13.30Walking lunch / poster session
13.30 - 14.30Jean-Marc Neefs — Janssen Pharmaceutica, Belgium
Pitfalls in applying text mining to scientific literature [pdf]
14.30 - 15.00Coffee break
15.00 - 16.00Luc Dehaspe & Maté Ongenaert — Oncomethylome, Belgium
Integrating automated literature searches and textmining in biomarker discovery [pdf]
16.00 - 17.00Discussion (round table)
17.00 - 17.15Final remarks